lp://staging/~fluidity-core/fluidity/fixTidalDiagnostics

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4323. By Alexandros Avdis on 2014-04-15

Small modification giving a better error message when tidal harmonic analysis fails. When failing to compute phase it should now report which tidal constituent fails.

4322. By Cian Wilson on 2014-03-29

BUG FIX: p%mesh should be p_theta%mesh. This was only a problem when using the viscous fs while testing the divergence using cv. This is tested but apparently not in parallel when you can't get away with using the wrong global node numbering.

4321. By Tim Greaves on 2014-03-28

Relaxing tolerances slightly after consultation with David, in response to a
slight change in the test result on Ubuntu Trusty. Note that this may be a
change from gmsh - the test passed fine on 2.5/2.6, failed intermittently with
2.8.3, and fails consistently with 2.8.4.

4320. By Stephan Kramer on 2014-02-19

Speed up of vtudiff for vtus with multiple fields.

This is done by only setting up the VTK probe once instead of once per field. It does not change anything in the way fields are probed.
This commit also enables the diffing of cell-based (P0) fields in the vtu (only works if they are on the same mesh).

There is also a little bit of cleaning up in vtktools:
* removing the option to call vtktools as a main: this really doesn't make sense and should be in a separate script
* removing the "field manipulation" methods. These were basically vectorial operations on fields but implemented in a rather inefficient way. I see no reason to not simply use numpy vector operations for that, so instead of:

vtu.SubFieldFromField("fieldName", array, "newFieldName")

just do:

field = vtu.GetField("fieldName")
vtu.AddField("newFieldName", field-array)

4319. By Stephan Kramer on 2014-02-11

Bug-fix: fixes bottom friction term for shallow water equations with CG velocity.

4318. By Gerard on 2014-02-10

Reran a more recent version of autoconf because older versions have a buggy AC_COMPUTE_INT macro.

4317. By Gerard on 2014-02-09

bugfix: fixes a long standing issue where incorrect parts were generated for include dirs when libadjoint was not installed.

4316. By Gerard on 2014-02-09

Patches to build to support ARCHER: patches include path from cray-petsc (have also reported bug to cray); extend hector hack for archer that forces libspud to be built statically.

4315. By Michael Lange on 2014-02-05

Fixing several bugs in lagrangian detectors:

 * Bug #1262890: Single lagrangian detectors are initialised with wrong names, causing detector I/O to fail in parallel
 * Bug #1260019: Prevent buffer corruption in exchange_detectors through use of multiple send/receive buffers
 * Re-initialisation of detector names from checkpoint

4314. By Rhodri Davies on 2014-01-20

Modify this test suc htaht results are consistent with and without debugging enabled (and also such that it passes on red hat). Thanks for Stephan and Tim for input.